2. Starting the Application

Last modified by Erik S on 2019/05/29 16:30

To use Regulome Explorer: Random Forest, you must first select a dataset to analyze.  The starting screen looks like this:

Regulome Explorer Random Forest - initial view.png

Click on the folder icon next to the cancer type you would like to view.  Then click on the appropriate subfolder icon, click the dataset, and click on Load at the bottom of the Load Dataset window.  For the Breast Cancer paper data, click on the folder icon for BRCA, then click on the 07-06-12 folder, then click on Breast Cancer Manuscript, and click on Load. 

Regulome Explorer Random Forest - load data.png

The Breast Cancer dataset will then be loaded.  Regulome Explorer consists of a Genome-level View in the left pane and a Filter Associations window in the right pane.  The initial display will show the top 200 gene expression associations.

Regulome Explorer Random Forest - data after load.png

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Created by Erik S on 2019/05/29 16:30

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